MolNFT v1 · #143323 · protein
1.90A resolution structure of catechol O-methyltransferase (comt) L136M (hexagonal form) from nannospalax galili
6AW5: “1.90A resolution structure of catechol O-methyltransferase (comt) L136M (hexagonal form) from nannospalax…”. X-ray diffraction, 2 ligands (NA, CL), 2 pockets (best druggability 0.56). MolNFT v1 #143323 on GenesisL1: 3D structure…
- PDB
- 6AW5
- Type
- protein
- Length
- 213 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Catechol O-methyltransferase
- Ligands
- NA, CL
- Pockets
- 2 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Catechol O-methyltransferase | protein | 213 | 46% helix, 23% strand | — |
Ligands and binding sites
- NA · Sodium ion · metal · chains A
- CL · Chloride ion · ion · 2 copies · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 198 | 0.56 | 0.79 | 30 | CL |
| 2 | 51 | 0.45 | 0.85 | 15 | empty |
Compared structures
- 6AW5 · 1.90A resolution structure of catechol O-methyltransferase (COMT) L136M (hexagonal form)… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6AW5 · PDBe 6AW5
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