MolNFT v1 · #143301 · protein

Crystal structure of human mitochondrial inner neet protein (mint) /CISD3

6AVJ · Cdgsh iron-sulfur domain-containing protein 3, mitochondrial: “Crystal structure of human mitochondrial inner neet protein (mint) /CISD3”. X-ray diffraction, 1 ligand (FES). MolNFT v1 #143301 on GenesisL1: 3D structure, binding…

PDB: 6AVJ
Type: protein
Length: 276 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cdgsh iron-sulfur domain-containing protein 3, mitochondrial
UniProt: P0C7P0
Ligands: FES

Structure

x-ray diffraction · 1 distinct chain · 12% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C	Cdgsh iron-sulfur domain-containing protein 3, mitochondrial	protein	92	12% helix, 23% strand	P0C7P0

Ligands and binding sites

FES · Fe2/s2 (inorganic) cluster · ligand · 6 copies · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

3 interfaces between chains.

A–B · 232 Å² buried · 3 hydrogen bonds · protein-protein
A–C · 215 Å² buried · 2 hydrogen bonds · protein-protein
B–C · 149 Å² buried · 2 hydrogen bonds · protein-protein

Compared structures

6AVJ · Crystal structure of human Mitochondrial inner NEET protein (MiNT)/CISD3 · the same entry in another collection · chain A against A, TM-score 1.00
P0C7P0 · AlphaFold monomer V2.0 prediction for cdgsh iron-sulfur domain- containing protein 3… · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0C7P0
Elsewhere: RCSB PDB 6AVJ · PDBe 6AVJ · UniProt P0C7P0

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