MolNFT v1 · #143299 · protein

GH3.15 acyl acid amido synthetase

6AVH: “GH3.15 acyl acid amido synthetase”. X-ray diffraction, 1 ligand (AMP). MolNFT v1 #143299 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6AVH
Type: protein
Length: 2,189 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q8GZ29
Ligands: AMP

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	547	—	Q8GZ29
B	—	protein	541	—	Q8GZ29
C	—	protein	552	—	Q8GZ29
D	—	protein	549	—	Q8GZ29

Ligands and binding sites

AMP · Adenosine monophosphate · ligand · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6AVH · GH3.15 acyl acid amido synthetase · the same entry in another collection · chain C against C, TM-score 1.00
Q8GZ29 · AlphaFold monomer V2.0 prediction for indole-3-acetic acid-amido synthetase GH3.15… · a predicted model of the same protein · chain C against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8GZ29
Elsewhere: RCSB PDB 6AVH · PDBe 6AVH · UniProt Q8GZ29

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