MolNFT v1 · #143124 · protein
Crystal structure of a trafficking protein particle complex subunit 3 from naegleria fowleri covalently bound to palmitic acid
6AQ3: “Crystal structure of a trafficking protein particle complex subunit 3 from naegleria fowleri covalently bound…”. X-ray diffraction, 1 ligand (PLM). MolNFT v1 #143124 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6AQ3
- Type
- protein
- Length
- 1,014 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- PLM
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 166 | — | — |
| B | — | protein | 171 | — | — |
| C | — | protein | 167 | — | — |
| D | — | protein | 170 | — | — |
| E | — | protein | 171 | — | — |
| F | — | protein | 169 | — | — |
Ligands and binding sites
- PLM · Palmitic acid · ligand · 6 copies · chains A, C, B, D, E, F
- EDO · 1,2-ethanediol · additive · 11 copies · chains A, C, B, D, F, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6AQ3 · Crystal structure of a trafficking protein particle complex subunit 3 from Naegleria… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6AQ3 · PDBe 6AQ3
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