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MolNFT v1 · #142969 · protein

Crebbp bromodomain in complex with cpd 30 (1-(3-(3-(1-methyl-1H- pyrazol-4-YL)ISOQUINOLIN-8-yl)-1-(tetrahydro-2H-pyran-4-yl)-1,4,6,7- tetrahydro-5H-PYRAZOLO[4,3-C]PYRIDIN-5-YL)ETHAN-1-one)

6ALB · Creb-binding protein: “Crebbp bromodomain in complex with cpd 30 (1-(3-(3-(1-methyl-1H…”. X-ray diffraction, 2 ligands (BKJ, ZN), 2 pockets (best druggability 0.47). MolNFT v1 #142969 on GenesisL1: 3D structure, binding sites and…

PDB
6ALB
Type
protein
Length
212 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Creb-binding protein
EC
2.3.1.48
UniProt
Q92793
Ligands
BKJ, ZN
Pockets
2 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 11% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACreb-binding protein (EC 2.3.1.48)protein21239% helix, 11% strandQ92793

Ligands and binding sites

  • BKJ · 1-{3-[3-(1-methyl-1H-pyrazol-4-yl)isoquinolin-8-yl]-1-(oxan-4-yl)-1,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridin-5-yl}ethan-1-one · ligand · chains A
  • ZN · Zinc ion · metal · 3 copies · chains A
  • B3P · 2-[3-(2-hydroxy-1,1-dihydroxymethyl-ethylamino)-propylamino]-2-hydroxymethyl-propane-1,3-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1740.470.8217BKJ
2500.240.7212B3P

Compared structures

  • 6ALB · CREBBP bromodomain in complex with Cpd 30 (1-(3-(3-(1-methyl-1H-pyrazol-4-yl)isoquinolin-8… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q92793 · AlphaFold monomer V2.0 prediction for creb-binding protein (Q92793) · a predicted model of the same protein · chain A against A, TM-score 0.87

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