MolNFT v1 · #14289 · protein

Mouse survivin

1M4M · Baculoviral iap repeat-containing protein 5: “Mouse survivin”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.42). MolNFT v1 #14289 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1M4M
Type: protein
Length: 112 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Baculoviral iap repeat-containing protein 5
UniProt: O70201
Ligands: ZN
Pockets: 1 · best druggability 0.42

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Baculoviral iap repeat-containing protein 5	protein	112	44% helix, 7% strand	O70201

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	99	0.42	0.78	20	empty

Compared structures

1M4M · Mouse Survivin · the same entry in another collection · chain A against A, TM-score 1.00
O70201 · AlphaFold monomer V2.0 prediction for baculoviral iap repeat- containing protein 5… · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O70201
Elsewhere: RCSB PDB 1M4M · PDBe 1M4M · UniProt O70201

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