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MolNFT v1 · #142853 · protein

Mouse kallikrein 7 in complex with imidazolinylindole derivative

6AHS · Kallikrein-7: “Mouse kallikrein 7 in complex with imidazolinylindole derivative”. X-ray diffraction, 2 ligands (9YO, CL), 1 pocket (best druggability 0.43). MolNFT v1 #142853 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
6AHS
Type
protein
Length
224 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Kallikrein-7
EC
3.4.21.117
UniProt
Q91VE3
Ligands
9YO, CL
Pockets
1 · best druggability 0.43

Structure

x-ray diffraction · 1 distinct chain · 11% helix, 37% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AKallikrein-7 (EC 3.4.21.117)protein22411% helix, 37% strandQ91VE3

Ligands and binding sites

  • 9YO · 1-[(2-chlorophenyl)sulfonyl]-5-methyl-3-[(4R)-2-methyl-4,5-dihydro-1H-imidazol-4-yl]-1H-indole · ligand · chains A
  • CL · Chloride ion · ion · 2 copies · chains A
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1810.430.80219YO

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

  • 6AHS · Mouse Kallikrein 7 in complex with imidazolinylindole derivative · the same entry in another collection · chain A against A, TM-score 1.00
  • Q91VE3 · AlphaFold monomer V2.0 prediction for kallikrein-7 (Q91VE3) · a predicted model of the same protein · chain A against A, TM-score 0.99

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