MolNFT v1 · #142645 · protein

Crystal structure of alpha-glucosyl transfer enzyme, xgta at 1.72 ångström resolution

6AAV · Alpha-glucosyltransferase: “Crystal structure of alpha-glucosyl transfer enzyme, xgta at 1.72 ångström resolution”. X-ray diffraction, 8 pockets (best druggability 0.74). MolNFT v1 #142645 on GenesisL1: 3D structure, binding sites…

PDB: 6AAV
Type: protein
Length: 1,071 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Alpha-glucosyltransferase
UniProt: Q76LB0
Pockets: 8 · best druggability 0.74

Structure

x-ray diffraction · 2 distinct chains · 29% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Alpha-glucosyltransferase	protein	536	29% helix, 20% strand	Q76LB0
B	Alpha-glucosyltransferase	protein	535	30% helix, 20% strand	Q76LB0

Pockets

8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	202	0.74	0.90	40	empty
2	198	0.72	0.89	44	empty
3	580	0.68	0.77	66	empty
4	107	0.56	0.85	20	empty
5	221	0.54	0.78	31	empty

Interfaces

1 interface between chains.

A–B · 1087 Å² buried · 6 hydrogen bonds · protein-protein

Compared structures

6AAV · Crystal structure of alpha-glucosyl transfer enzyme, XgtA at 1.72 angstrom resolution · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q76LB0
Elsewhere: RCSB PDB 6AAV · PDBe 6AAV · UniProt Q76LB0

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