MolNFT v1 · #14264 · protein
Crystal structure of a molecular maquette scaffold
1M3W · H10H24: “Crystal structure of a molecular maquette scaffold”. X-ray diffraction, 2 ligands (HG, NH2). MolNFT v1 #14264 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1M3W
- Type
- protein
- Length
- 120 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- H10H24
- Ligands
- HG, NH2
Structure
x-ray diffraction · 1 distinct chain · 90% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | H10H24 | protein | 30 | 90% helix, 0% strand | — |
Ligands and binding sites
- HG · Mercury (II) ion · metal · 2 copies · chains C, D, A, B
- NH2 · Amino group · ion · 4 copies · chains A, B, D, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
6 interfaces between chains.
- A–C · 767 Ų buried · 6 hydrogen bonds · protein-protein
- A–B · 689 Ų buried · 4 hydrogen bonds · protein-protein
- C–D · 685 Ų buried · 3 hydrogen bonds · protein-protein
- B–D · 583 Ų buried · 0 hydrogen bonds · protein-protein
- B–C · 110 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 1M3W · Crystal Structure of a Molecular Maquette Scaffold · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1M3W · PDBe 1M3W
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.