MolNFT v1 · #142601 · protein

Crystal structure of the strigolactone receptor SHHTL7 from striga hermonthica

6A9D · Hyposensitive to light 7: “Crystal structure of the strigolactone receptor SHHTL7 from striga hermonthica”. X-ray diffraction, 4 pockets (best druggability 0.77). MolNFT v1 #142601 on GenesisL1: 3D structure, binding sites and…

PDB: 6A9D
Type: protein
Length: 541 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hyposensitive to light 7
UniProt: A0A0M3PNA2
Pockets: 4 · best druggability 0.77

Structure

x-ray diffraction · 2 distinct chains · 46% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hyposensitive to light 7	protein	275	44% helix, 17% strand	A0A0M3PNA2
B	Hyposensitive to light 7	protein	266	47% helix, 17% strand	A0A0M3PNA2

Ligands and binding sites

GOL · Glycerol · additive · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	283	0.77	0.89	37	empty
2	287	0.76	0.88	35	empty
3	72	0.33	0.75	16	empty
4	69	0.31	0.74	13	empty

Interfaces

1 interface between chains.

A–B · 586 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

6A9D · Crystal structure of the strigolactone receptor ShHTL7 from Striga hermonthica · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0M3PNA2
Elsewhere: RCSB PDB 6A9D · PDBe 6A9D · UniProt A0A0M3PNA2

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