MolNFT v1 · #142574 · protein
N-terminal domain of fact complex subunit SPT16 from eremothecium gossypii (ashbya gossypii)
6A8M: “N-terminal domain of fact complex subunit SPT16 from eremothecium gossypii (ashbya gossypii)”. X-ray diffraction, 4 pockets (best druggability 0.65). MolNFT v1 #142574 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6A8M
- Type
- protein
- Length
- 442 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fact complex subunit SPT16
- UniProt
- Q756A7
- Pockets
- 4 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fact complex subunit SPT16 | protein | 442 | 42% helix, 22% strand | Q756A7 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 235 | 0.65 | 0.83 | 37 | empty |
| 2 | 77 | 0.51 | 0.84 | 21 | empty |
| 3 | 111 | 0.48 | 0.80 | 16 | empty |
| 4 | 116 | 0.38 | 0.75 | 20 | empty |
Compared structures
- 6A8M · N-terminal domain of FACT complex subunit SPT16 from Eremothecium gossypii (Ashbya… · the same entry in another collection · chain A against A, TM-score 1.00
- Q756A7 · AlphaFold monomer V2.0 prediction for fact complex subunit SPT16 (Q756A7) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q756A7
- Elsewhere: RCSB PDB 6A8M · PDBe 6A8M · UniProt Q756A7
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