MolNFT v1 · #142365 · protein
Crystal structure of dimeric kinesin-3 KIF13B
6A1Z · Kinesin family member 13B: “Crystal structure of dimeric kinesin-3 KIF13B”. X-ray diffraction, 2 ligands (ADP, MG), 3 pockets (best druggability 0.64). MolNFT v1 #142365 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6A1Z
- Type
- protein
- Length
- 352 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Kinesin family member 13B
- UniProt
- A0A0G2K8Z9
- Ligands
- ADP, MG
- Pockets
- 3 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Kinesin family member 13B | protein | 352 | 33% helix, 27% strand | A0A0G2K8Z9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 268 | 0.64 | 0.81 | 29 | MG |
| 2 | 67 | 0.44 | 0.82 | 18 | empty |
| 3 | 80 | 0.34 | 0.76 | 19 | MG |
Compared structures
- 6A1Z · Crystal Structure of dimeric Kinesin-3 KIF13B · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0G2K8Z9
- Elsewhere: RCSB PDB 6A1Z · PDBe 6A1Z · UniProt A0A0G2K8Z9
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