MolNFT v1 · #142350 · protein
Phosphate acyltransferase plsx from B.SUBTILIS
6A1K: “Phosphate acyltransferase plsx from B.SUBTILIS”. X-ray diffraction, 1 ligand (SO4), 4 pockets (best druggability 0.74). MolNFT v1 #142350 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6A1K
- Type
- protein
- Length
- 651 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phosphate acyltransferase
- EC
- 2.3.1.-
- UniProt
- P71018
- Ligands
- SO4
- Pockets
- 4 · best druggability 0.74
Structure
x-ray diffraction · 2 distinct chains · 47% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphate acyltransferase (EC 2.3.1.-) | protein | 326 | 46% helix, 17% strand | P71018 |
| B | Phosphate acyltransferase (EC 2.3.1.-) | protein | 325 | 47% helix, 17% strand | P71018 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 821 | 0.74 | 0.79 | 89 | empty |
| 2 | 500 | 0.64 | 0.76 | 63 | empty |
| 3 | 104 | 0.41 | 0.77 | 18 | empty |
| 4 | 70 | 0.31 | 0.75 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 2060 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P71018
- Elsewhere: RCSB PDB 6A1K · PDBe 6A1K · UniProt P71018
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