MolNFT v1 · #142209 · protein
Crystal structure of recombination mediator protein recf
5ZWU · DNA replication and repair protein recf: “Crystal structure of recombination mediator protein recf”. X-ray diffraction, 6 pockets (best druggability 0.71). MolNFT v1 #142209 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5ZWU
- Type
- protein
- Length
- 341 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA replication and repair protein recf
- UniProt
- Q5SLM9
- Pockets
- 6 · best druggability 0.71
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA replication and repair protein recf | protein | 341 | 45% helix, 23% strand | Q5SLM9 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 190 | 0.71 | 0.88 | 30 | empty |
| 2 | 62 | 0.63 | 0.92 | 18 | empty |
| 3 | 145 | 0.41 | 0.74 | 19 | empty |
| 4 | 58 | 0.37 | 0.79 | 19 | empty |
| 5 | 71 | 0.34 | 0.75 | 11 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5ZWU · Crystal structure of recombination mediator protein RecF · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SLM9
- Elsewhere: RCSB PDB 5ZWU · PDBe 5ZWU · UniProt Q5SLM9
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