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MolNFT v1 · #142047 · protein

M. smegmatis antimutator protein MUTT2 in complex with cmp

5ZRH · Putative mutator protein MUTT2/NUDIX hydrolase: “M. smegmatis antimutator protein MUTT2 in complex with cmp”. X-ray diffraction, 1 ligand (C5P), 1 pocket (best druggability 0.48). MolNFT v1 #142047 on GenesisL1: 3D structure…

PDB
5ZRH
Type
protein
Length
127 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Putative mutator protein MUTT2/NUDIX hydrolase
UniProt
I7FJF7
Ligands
C5P
Pockets
1 · best druggability 0.48

Structure

x-ray diffraction · 1 distinct chain · 21% helix, 38% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APutative mutator protein MUTT2/NUDIX hydrolaseprotein12721% helix, 38% strandI7FJF7

Ligands and binding sites

  • C5P · Cytidine-5'-monophosphate · ligand · chains A
  • EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11290.480.7826C5P

Compared structures

  • 5ZRH · M. smegmatis antimutator protein MutT2 in complex with CMP · the same entry in another collection · chain A against A, TM-score 1.00

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