MolNFT v1 · #141836 · protein + DNA
Crystal structure of streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA tcttcc
5ZKM: “Crystal structure of streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA…”. X-ray diffraction. MolNFT v1 #141836 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5ZKM
- Type
- protein + DNA
- Length
- 68 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SP_0782; DNA (5'-D(P*TP*CP*TP*TP*CP*C)-3')
- UniProt
- A0A0H2UPA7
Structure
x-ray diffraction · 2 distinct chains · 16% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SP_0782 | protein | 67 | 16% helix, 52% strand | A0A0H2UPA7 |
| B | DNA (5'-D(P*TP*CP*TP*TP*CP*C)-3') | dna | 1 | — | — |
Interfaces
1 interface between chains.
- A–B · 149 Ų buried · 1 hydrogen bond · protein-nucleic
Compared structures
- 5ZKM · Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H2UPA7
- Elsewhere: RCSB PDB 5ZKM · PDBe 5ZKM · UniProt A0A0H2UPA7
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