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MolNFT v1 · #14183 · protein

Human acidic fibroblast growth factor. 141 amino acid form with amino terminal his tag and leu 44 replaced with phe (L44F), leu 73 replaced with val (L73V), val 109 replaced with leu (V109L) and cys 117 replaced with val (C117V).

1M16: “Human acidic fibroblast growth factor. 141 amino acid form with amino terminal his tag and leu 44 replaced…”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.38). MolNFT v1 #14183 on GenesisL1: 3D structure, binding…

PDB
1M16
Type
protein
Length
284 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Acidic fibroblast growth factor
UniProt
P05230
Ligands
SO4
Pockets
1 · best druggability 0.38

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 40% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BAcidic fibroblast growth factorprotein1426% helix, 40% strandP05230

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 2 copies · chains A, B
  • FMT · Formic acid · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11150.380.7524empty

Interfaces

1 interface between chains.

  • A–B · 435 Ų buried · 6 hydrogen bonds · protein-protein

Compared structures

  • 1M16 · Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form with Amino Terminal His Tag… · the same entry in another collection · chain A against A, TM-score 1.00
  • P05230 · AlphaFold monomer V2.0 prediction for fibroblast growth factor 1 (P05230) · a predicted model of the same protein · chain A against A, TM-score 0.96

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