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MolNFT v1 · #141785 · protein

Crystal structure of ndm-1 in complex with D-captopril derivative cyt- 14

5ZJ1: “Crystal structure of ndm-1 in complex with D-captopril derivative cyt- 14”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #141785 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5ZJ1
Type
protein
Length
230 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
C7C422
Ligands
ZN

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein230—C7C422

Ligands and binding sites

  • ZN · Zinc ion · metal · 2 copies · chains A
  • EDO · 1,2-ethanediol · additive · 5 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5ZJ1 · Crystal structure of NDM-1 in complex with D-captopril derivative CYT-14 · the same entry in another collection · chain A against A, TM-score 1.00
  • C7C422 · AlphaFold monomer V2.0 prediction for metallo-beta-lactamase type 2 (C7C422) · a predicted model of the same protein · chain A against A, TM-score 0.99

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