MolNFT v1 · #141555 · protein
Crystal structure of aere from microcystis aeruginosa
5ZBE · Cupin domain protein: “Crystal structure of aere from microcystis aeruginosa”. X-ray diffraction, 1 ligand (FE2), 2 pockets (best druggability 0.57). MolNFT v1 #141555 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5ZBE
- Type
- protein
- Length
- 209 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cupin domain protein
- UniProt
- L8NZJ8
- Ligands
- FE2
- Pockets
- 2 · best druggability 0.57
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 58% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cupin domain protein | protein | 209 | 0% helix, 58% strand | L8NZJ8 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 69 | 0.57 | 0.88 | 22 | PGE |
| 2 | 70 | 0.36 | 0.78 | 22 | empty |
Compared structures
- 5ZBE · Crystal structure of AerE from Microcystis aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt L8NZJ8
- Elsewhere: RCSB PDB 5ZBE · PDBe 5ZBE · UniProt L8NZJ8
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