MolNFT v1 · #141537 · DNA

Crystal structure of 5-carboxylcytosine containing decamer dsdna

5ZAT · DNA (5'-D(*CP*CP*AP*GP*(CAC)P*GP*CP*TP*GP*G)-3'): “Crystal structure of 5-carboxylcytosine containing decamer dsdna”. X-ray diffraction. MolNFT v1 #141537 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5ZAT
Type: DNA
Length: 20 nucleotides
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA (5'-D(*CP*CP*AP*GP*(CAC)P*GP*CP*TP*GP*G)-3')

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	DNA (5'-D(CPCPAPGP(CAC)PGPCPTPGPG)-3')	dna	10	—	—

Interfaces

1 interface between chains.

A–B · 502 Å² buried · 46 hydrogen bonds · nucleic-nucleic

Modifications

Observed in the structure: 2 modified (nucleotide modification).

Compared structures

5ZAT · Crystal structure of 5-carboxylcytosine containing decamer dsDNA · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 5ZAT · PDBe 5ZAT

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.