MolNFT v1 · #141323 · protein

Crystal structure of abrin a chain (recombinant) in complex with adenine at 1.65 ångströms

5Z3I · Abrin a-chain: “Crystal structure of abrin a chain (recombinant) in complex with adenine at 1.65 ångströms”. X-ray diffraction, 1 ligand (ADE), 1 pocket (best druggability 0.45). MolNFT v1 #141323 on GenesisL1: 3D structure, binding…

PDB: 5Z3I
Type: protein
Length: 247 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Abrin a-chain
UniProt: Q7DM12
Ligands: ADE
Pockets: 1 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Abrin a-chain	protein	247	43% helix, 24% strand	Q7DM12

Ligands and binding sites

ADE · Adenine · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	75	0.45	0.81	15	ADE

Compared structures

5Z3I · Crystal Structure of Abrin A chain (Recombinant) in complex with Adenine at 1.65 Angstroms · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7DM12
Elsewhere: RCSB PDB 5Z3I · PDBe 5Z3I · UniProt Q7DM12

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