MolNFT v1 · #141116 · protein

SSCR_L211H-NADP+

5YWN · Protein induced by osmotic stress: “SSCR_L211H-NADP+”. X-ray diffraction, 1 ligand (NAP), 3 pockets (best druggability 0.75). MolNFT v1 #141116 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5YWN
Type: protein
Length: 333 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein induced by osmotic stress
EC: 1.1.1.195
UniProt: A3LWG4
Ligands: NAP
Pockets: 3 · best druggability 0.75

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein induced by osmotic stress (EC 1.1.1.195)	protein	333	46% helix, 15% strand	A3LWG4

Ligands and binding sites

NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	615	0.75	0.81	68	NAP
2	65	0.43	0.82	19	empty
3	50	0.35	0.79	13	empty

Compared structures

5YWN · SsCR_L211H-NADP+ · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A3LWG4
Elsewhere: RCSB PDB 5YWN · PDBe 5YWN · UniProt A3LWG4

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