MolNFT v1 · #140973 · protein
Crystal structure of beta-1,2-glucooligosaccharide binding protein in complex with sophoropentaose
5YSF: “Crystal structure of beta-1,2-glucooligosaccharide binding protein in complex with sophoropentaose”. X-ray diffraction, 2 ligands (BGC, MG). MolNFT v1 #140973 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YSF
- Type
- protein
- Length
- 777 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q92AS8
- Ligands
- BGC, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 388 | — | Q92AS8 |
| B | — | protein | 389 | — | Q92AS8 |
Ligands and binding sites
- BGC · beta-D-glucopyranose · sugar · 10 copies · chains A, B
- MG · Magnesium ion · metal · chains A
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YSF · Crystal structure of beta-1,2-glucooligosaccharide binding protein in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92AS8
- Elsewhere: RCSB PDB 5YSF · PDBe 5YSF · UniProt Q92AS8
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