MolNFT v1 · #140943 · protein
PPL3B-trehalose complex
5YRI: “PPL3B-trehalose complex”. X-ray diffraction, 2 ligands (GLC, SO4). MolNFT v1 #140943 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YRI
- Type
- protein
- Length
- 284 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B6F0T7
- Ligands
- GLC, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 142 | — | B6F0T7 |
| B | — | protein | 142 | — | — |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 4 copies · chains B, A
- SO4 · Sulfate ion · ion · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YRI · PPL3B-trehalose complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B6F0T7
- Elsewhere: RCSB PDB 5YRI · PDBe 5YRI · UniProt B6F0T7
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