MolNFT v1 · #140904 · protein

Crystal structure of kelch domain of KLHL20

5YQ4 · Kelch-like protein 20: “Crystal structure of kelch domain of KLHL20”. X-ray diffraction, 1 pocket (best druggability 0.75). MolNFT v1 #140904 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5YQ4
Type: protein
Length: 284 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Kelch-like protein 20
UniProt: Q9Y2M5
Pockets: 1 · best druggability 0.75

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 51% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Kelch-like protein 20	protein	284	0% helix, 51% strand	Q9Y2M5

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	745	0.75	0.80	59	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

5YQ4 · Crystal structure of kelch domain of KLHL20 · the same entry in another collection · chain A against A, TM-score 1.00
Q9Y2M5 · AlphaFold monomer V2.0 prediction for kelch-like protein 20 (Q9Y2M5) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9Y2M5
Elsewhere: RCSB PDB 5YQ4 · PDBe 5YQ4 · UniProt Q9Y2M5

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