MolNFT v1 · #140642 · protein
Crystal structure of yiim from geobacillus stearothermophilus
5YHH · Uncharacterized conserved protein yiim: “Crystal structure of yiim from geobacillus stearothermophilus”. X-ray diffraction, 1 pocket (best druggability 0.49). MolNFT v1 #140642 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 5YHH
- Type
- protein
- Length
- 195 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized conserved protein yiim
- Pockets
- 1 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized conserved protein yiim | protein | 195 | 27% helix, 32% strand | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 220 | 0.49 | 0.75 | 32 | empty |
Modifications
Observed in the structure: 1 modified (oxidation).
Compared structures
- 5YHH · Crystal structure of YiiM from Geobacillus stearothermophilus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5YHH · PDBe 5YHH
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