MolNFT v1 · #140559 · protein
Crystal structure of bioq
5YEK · Tetr family transcriptional regulator: “Crystal structure of bioq”. X-ray diffraction, 1 pocket (best druggability 0.40). MolNFT v1 #140559 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YEK
- Type
- protein
- Length
- 334 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tetr family transcriptional regulator
- UniProt
- I7FDJ0
- Pockets
- 1 · best druggability 0.40
Structure
x-ray diffraction · 2 distinct chains · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tetr family transcriptional regulator | protein | 167 | 75% helix, 0% strand | I7FDJ0 |
| B | Tetr family transcriptional regulator | protein | 167 | 77% helix, 0% strand | I7FDJ0 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.40 | 0.82 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 294 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 5YEK · Crystal structure of BioQ · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I7FDJ0
- Elsewhere: RCSB PDB 5YEK · PDBe 5YEK · UniProt I7FDJ0
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