MolNFT v1 · #140537 · protein
Regulatory domain of hypt from salmonella typhimurium complexed with hocl (hocl-bound form)
5YDV · Cell density-dependent motility repressor: “Regulatory domain of hypt from salmonella typhimurium complexed with hocl (hocl-bound form)”. X-ray diffraction, 2 ligands (8TR, SO4). MolNFT v1 #140537 on GenesisL1: 3D structure, binding…
- PDB
- 5YDV
- Type
- protein
- Length
- 209 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cell density-dependent motility repressor
- UniProt
- A0A0J5DK07
- Ligands
- 8TR, SO4
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cell density-dependent motility repressor | protein | 209 | 33% helix, 32% strand | A0A0J5DK07 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YDV · Regulatory domain of HypT from Salmonella typhimurium complexed with HOCl (HOCl-bound… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0J5DK07
- Elsewhere: RCSB PDB 5YDV · PDBe 5YDV · UniProt A0A0J5DK07
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