MolNFT v1 · #140481 · protein

Crystal structure of AL3 phd finger bound to H3K4ME3

5YC4: “Crystal structure of AL3 phd finger bound to H3K4ME3”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #140481 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5YC4
Type: protein
Length: 69 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9M2B4
Ligands: ZN

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	60	—	Q9M2B4
P	—	protein	9	—	—

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5YC4 · Crystal structure of AL3 PHD finger bound to H3K4me3 · the same entry in another collection · chain A against A, TM-score 1.00
Q9M2B4 · AlphaFold monomer V2.0 prediction for phd finger protein alfin-like 3 (Q9M2B4) · a predicted model of the same protein · chain A against A, TM-score 0.82

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9M2B4
Elsewhere: RCSB PDB 5YC4 · PDBe 5YC4 · UniProt Q9M2B4

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