MolNFT v1 · #140472 · protein
The structure of the KANK2 ankyrin domain with the KIF21A peptide
5YBV: “The structure of the KANK2 ankyrin domain with the KIF21A peptide”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #140472 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YBV
- Type
- protein
- Length
- 517 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q63ZY3, Q7Z4S6
- Ligands
- SO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 244 | — | Q63ZY3 |
| B | — | protein | 243 | — | Q63ZY3 |
| C, D | — | protein | 15 | — | Q7Z4S6 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YBV · The structure of the KANK2 ankyrin domain with the KIF21A peptide · the same entry in another collection · chain A against A, TM-score 1.00
- Q63ZY3 · AlphaFold monomer V2.0 prediction for kn motif and ankyrin repeat domain-containing… · a predicted model of the same protein · chain B against A, TM-score 0.98
- Q7Z4S6 · AlphaFold monomer V2.0 prediction for kinesin-like protein KIF21A (Q7Z4S6) · a predicted model of the same protein · chain C against A, TM-score 0.36
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q63ZY3
- Every structure of UniProt Q7Z4S6
- Elsewhere: RCSB PDB 5YBV · PDBe 5YBV · UniProt Q63ZY3 · UniProt Q7Z4S6
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