MolNFT v1 · #140352 · RNA
Structure-based insights into self-cleavage by a four-way junctional twister-sister ribozyme
5Y85: “Structure-based insights into self-cleavage by a four-way junctional twister-sister ribozyme”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #140352 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5Y85
- Type
- RNA
- Length
- 136 nucleotides
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | rna | 18 | — | — |
| B, D | — | rna | 50 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 26 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5Y85 · Structure-based Insights into Self-Cleavage by a Four-way Junctional Twister-Sister… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5Y85 · PDBe 5Y85
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