MolNFT v1 · #140248 · protein

Discoidin domain of human CASPR2

5Y4M · Human CASPR2 disc domain: “Discoidin domain of human CASPR2”. X-ray diffraction. MolNFT v1 #140248 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5Y4M
Type: protein
Length: 150 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Human CASPR2 disc domain
UniProt: Q9UHC6

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Human CASPR2 disc domain	protein	150	6% helix, 47% strand	Q9UHC6

Ligands and binding sites

EDO · 1,2-ethanediol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

5Y4M · Discoidin domain of human CASPR2 · the same entry in another collection · chain A against A, TM-score 1.00
Q9UHC6 · AlphaFold monomer V2.0 prediction for contactin-associated protein- like 2 (Q9UHC6) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9UHC6
Elsewhere: RCSB PDB 5Y4M · PDBe 5Y4M · UniProt Q9UHC6

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.