MolNFT v1 · #140197 · protein
Crystal structure of halotag (M175C) complexed with dansyl-PEG2- halotag ligand
5Y2Y: “Crystal structure of halotag (M175C) complexed with dansyl-PEG2- halotag ligand”. X-ray diffraction, 2 ligands (8LL, CL). MolNFT v1 #140197 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5Y2Y
- Type
- protein
- Length
- 583 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0A3G3
- Ligands
- 8LL, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 291 | — | P0A3G3 |
| B | — | protein | 292 | — | P0A3G3 |
Ligands and binding sites
- 8LL · 5-(dimethylamino)-~{N}-[2-(2-hexoxyethoxy) ethyl]naphthalene-1-sulfonamide · ligand · 2 copies · chains A, B
- CL · Chloride ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5Y2Y · Crystal structure of HaloTag (M175C) complexed with dansyl-PEG2-HaloTag ligand · the same entry in another collection · chain A against A, TM-score 1.00
- P0A3G3 · AlphaFold monomer V2.0 prediction for haloalkane dehalogenase (P0A3G3) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A3G3
- Elsewhere: RCSB PDB 5Y2Y · PDBe 5Y2Y · UniProt P0A3G3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.