MolNFT v1 · #140185 · protein
Crystal structure of a group 2 ha binding antibody AF4H1K1 Fab in complex with the 1968 H3N2 pandemic (H3-AC/68) hemagglutinin
5Y2L: “Crystal structure of a group 2 ha binding antibody AF4H1K1 Fab in complex with the 1968 H3N2 pandemic…”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #140185 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5Y2L
- Type
- protein
- Length
- 916 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P03437
- Ligands
- NAG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 317 | — | P03437 |
| B | — | protein | 163 | — | P03437 |
| I | — | protein | 224 | — | — |
| J | — | protein | 212 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 6 copies · chains A, I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5Y2L · Crystal structure of a group 2 HA binding antibody AF4H1K1 Fab in complex with the 1968… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03437
- Elsewhere: RCSB PDB 5Y2L · PDBe 5Y2L · UniProt P03437
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