MolNFT v1 · #140104 · protein

Structural characterization of MSMEG_4306 from mycobacterium smegmatis

5Y05: “Structural characterization of MSMEG_4306 from mycobacterium smegmatis”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.34). MolNFT v1 #140104 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5Y05
Type: protein
Length: 233 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: MSMEG_4306
UniProt: A0R095
Ligands: ZN
Pockets: 1 · best druggability 0.34

Structure

x-ray diffraction · 1 distinct chain · 76% helix, 6% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	MSMEG_4306	protein	233	76% helix, 6% strand	A0R095

Ligands and binding sites

ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	56	0.34	0.77	16	empty

Compared structures

5Y05 · Structural characterization of msmeg_4306 from Mycobacterium smegmatis · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0R095
Elsewhere: RCSB PDB 5Y05 · PDBe 5Y05 · UniProt A0R095

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.