MolNFT v1 · #139963 · protein + DNA
E. far CAS1-CAS2/PRESPACER binary complex
5XVN: “E. far CAS1-CAS2/PRESPACER binary complex”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #139963 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5XVN
- Type
- protein + DNA
- Length
- 2,786 residues
- Chains
- 16
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- E6GPD7, E6GPD6
- Ligands
- MG
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, I, K | — | protein | 285 | — | E6GPD7 |
| B, J, L | — | protein | 288 | — | E6GPD7 |
| D | — | protein | 259 | — | E6GPD7 |
| E, N | — | protein | 104 | — | E6GPD6 |
| F, M | — | protein | 108 | — | E6GPD6 |
| G | — | dna | 25 | — | — |
| H, P | — | dna | 24 | — | — |
| O | — | dna | 26 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 4 copies · chains E, F, H, G, M, N, P, O
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5XVN · E. far Cas1-Cas2/prespacer binary complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E6GPD7
- Every structure of UniProt E6GPD6
- Elsewhere: RCSB PDB 5XVN · PDBe 5XVN · UniProt E6GPD7 · UniProt E6GPD6
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