MolNFT v1 · #139728 · protein
Crystal structure of human SMAD2-ski complex
5XOD · Mothers against decapentaplegic homolog 2: “Crystal structure of human SMAD2-ski complex”. X-ray diffraction. MolNFT v1 #139728 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5XOD
- Type
- protein
- Length
- 215 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mothers against decapentaplegic homolog 2; Ski oncogene
- UniProt
- Q15796, P12755
Structure
x-ray diffraction · 2 distinct chains · 29% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mothers against decapentaplegic homolog 2 | protein | 193 | 26% helix, 30% strand | Q15796 |
| B | Ski oncogene | protein | 22 | 55% helix, 0% strand | P12755 |
Interfaces
1 interface between chains.
- A–B · 925 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 5XOD · Crystal structure of human Smad2-Ski complex · the same entry in another collection · chain A against A, TM-score 1.00
- Q15796 · AlphaFold monomer V2.0 prediction for mothers against decapentaplegic homolog 2 (Q15796) · a predicted model of the same protein · chain A against A, TM-score 0.93
- P12755 · AlphaFold monomer V2.0 prediction for ski oncogene (P12755) · a predicted model of the same protein · chain B against A, TM-score 0.52
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q15796
- Every structure of UniProt P12755
- Elsewhere: RCSB PDB 5XOD · PDBe 5XOD · UniProt Q15796 · UniProt P12755
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