MolNFT v1 · #139450 · protein
Crystal structure of mitsuba-1 with bound nacgal
5XG5: “Crystal structure of mitsuba-1 with bound nacgal”. X-ray diffraction, 1 ligand (A2G). MolNFT v1 #139450 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5XG5
- Type
- protein
- Length
- 145 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mitsuba-1
- Ligands
- A2G
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mitsuba-1 | protein | 145 | 6% helix, 43% strand | — |
Ligands and binding sites
- A2G · 2-acetamido-2-deoxy-alpha-D-galactopyranose · sugar · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5XG5 · Crystal structure of Mitsuba-1 with bound NAcGal · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5XG5 · PDBe 5XG5
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