MolNFT v1 · #139397 · protein
Crystal structure of the smc head domain with a coiled coil and joint derived from pyrococcus yayanosii
5XEI · Chromosome partition protein smc: “Crystal structure of the smc head domain with a coiled coil and joint derived from pyrococcus yayanosii”. X-ray diffraction, 3 pockets (best druggability 0.63). MolNFT v1 #139397 on GenesisL1: 3D…
- PDB
- 5XEI
- Type
- protein
- Length
- 517 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chromosome partition protein smc
- UniProt
- F8AFS8
- Pockets
- 3 · best druggability 0.63
Structure
x-ray diffraction · 1 distinct chain · 55% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chromosome partition protein smc | protein | 517 | 55% helix, 16% strand | F8AFS8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 281 | 0.63 | 0.80 | 43 | empty |
| 2 | 63 | 0.37 | 0.79 | 18 | empty |
| 3 | 51 | 0.32 | 0.77 | 17 | empty |
Compared structures
- 5XEI · Crystal structure of the Smc head domain with a coiled coil and joint derived from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F8AFS8
- Elsewhere: RCSB PDB 5XEI · PDBe 5XEI · UniProt F8AFS8
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