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MolNFT v1 · #139380 · protein

Crystal structure of zebrafish SNX25 px domain

5XDZ: “Crystal structure of zebrafish SNX25 px domain”. X-ray diffraction, 2 ligands (NA, CL). MolNFT v1 #139380 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5XDZ
Type
protein
Length
226 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
C6K2H9
Ligands
NA, CL

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
B—protein113—C6K2H9
A—protein113—C6K2H9

Ligands and binding sites

  • NA · Sodium ion · metal · 2 copies · chains B, A
  • CL · Chloride ion · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5XDZ · Crystal structure of zebrafish SNX25 PX domain · the same entry in another collection · chain B against B, TM-score 1.00

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