MolNFT v1 · #139368 · protein

Structure of the C-terminal domain of E. COLI minc at 3.0 ångström resolution

5XDM · Septum site-determining protein minc: “Structure of the C-terminal domain of E. COLI minc at 3.0 ångström resolution”. X-ray diffraction, 1 pocket (best druggability 0.49). MolNFT v1 #139368 on GenesisL1: 3D structure, binding sites…

PDB: 5XDM
Type: protein
Length: 220 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Septum site-determining protein minc
UniProt: P18196
Pockets: 1 · best druggability 0.49

Structure

x-ray diffraction · 2 distinct chains · 4% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Septum site-determining protein minc	protein	111	3% helix, 46% strand	P18196
B	Septum site-determining protein minc	protein	109	6% helix, 49% strand	P18196

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	186	0.49	0.76	29	empty

Interfaces

1 interface between chains.

A–B · 408 Å² buried · 8 hydrogen bonds · protein-protein

Compared structures

5XDM · Structure of the C-terminal domain of E. coli MinC at 3.0 angstrom resolution · the same entry in another collection · chain A against A, TM-score 1.00
P18196 · AlphaFold monomer V2.0 prediction for septum site-determining protein minc (P18196) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P18196
Elsewhere: RCSB PDB 5XDM · PDBe 5XDM · UniProt P18196

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.