MolNFT v1 · #13921 · protein
NMR structure of the unliganded bombyx mori pheromone-binding protein at physiological pH
1LS8 · Pheromone binding protein: “NMR structure of the unliganded bombyx mori pheromone-binding protein at physiological pH”. Solution nmr, 1 pocket (best druggability 0.85). MolNFT v1 #13921 on GenesisL1: 3D structure, binding sites and…
- PDB
- 1LS8
- Type
- protein
- Length
- 142 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pheromone binding protein
- UniProt
- P34174
- Pockets
- 1 · best druggability 0.85
Structure
solution nmr · 1 distinct chain · 51% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pheromone binding protein | protein | 142 | 51% helix, 1% strand | P34174 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 539 | 0.85 | 0.90 | 62 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 1LS8 · NMR structure of the unliganded Bombyx mori pheromone-binding protein at physiological pH · the same entry in another collection · chain A against A, TM-score 1.00
- P34174 · AlphaFold monomer V2.0 prediction for pheromone-binding protein (P34174) · a predicted model of the same protein · chain A against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P34174
- Elsewhere: RCSB PDB 1LS8 · PDBe 1LS8 · UniProt P34174
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