MolNFT v1 · #139090 · protein
Crystal structure of the BCL6 btb domain in complex with compound 1
5X4M · B-cell lymphoma 6 protein: “Crystal structure of the BCL6 btb domain in complex with compound 1”. X-ray diffraction, 1 ligand (7ZF). MolNFT v1 #139090 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5X4M
- Type
- protein
- Length
- 131 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- B-cell lymphoma 6 protein
- UniProt
- P41182
- Ligands
- 7ZF
Structure
x-ray diffraction · 1 distinct chain · 52% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | B-cell lymphoma 6 protein | protein | 131 | 52% helix, 16% strand | P41182 |
Ligands and binding sites
- 7ZF · N-phenyl-1,3,5-triazine-2,4-diamine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5X4M · Crystal structure of the BCL6 BTB domain in complex with Compound 1 · the same entry in another collection · chain A against A, TM-score 1.00
- P41182 · AlphaFold monomer V2.0 prediction for B-cell lymphoma 6 protein (P41182) · a predicted model of the same protein · chain A against A, TM-score 0.32
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P41182
- Elsewhere: RCSB PDB 5X4M · PDBe 5X4M · UniProt P41182
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.