MolNFT v1 · #139 · DNA

A single 2'-hydroxyl group converts B-DNA to a-DNA: crystal structure of the DNA-RNA chimeric decamer duplex D(CCGGC) R(G)D(CCGG) with a novel intermolecular G.C base-paired quadruplet

161D · DNA/RNA (5'-D(*CP*CP*GP*GP*CP*)-R(*GP*)- D(*CP*CP*GP*G)-3'): “A single 2'-hydroxyl group converts B-DNA to a-DNA: crystal structure of the DNA-RNA chimeric decamer duplex…”. X-ray diffraction. MolNFT v1 #139 on GenesisL1: 3D…

PDB: 161D
Type: DNA
Length: 20 nucleotides
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA/RNA (5'-D(*CP*CP*GP*GP*CP*)-R(*GP*)- D(*CP*CP*GP*G)-3')

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	DNA/RNA (5'-D(CPCPGPGPCP)-R(GP)- D(CPCPGPG)-3')	dna	10	—	—

Interfaces

1 interface between chains.

A–B · 543 Å² buried · 44 hydrogen bonds · nucleic-nucleic

Compared structures

161D · A single 2'-hydroxyl group converts B-DNA to a-DNA: crystal structure of the DNA-RNA… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 161D · PDBe 161D

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