MolNFT v1 · #138995 · protein
VANILLATE/3-O-methylgallate O-demethylase, ligm, 3-O-methylgallate complex form
5X1K: “VANILLATE/3-O-methylgallate O-demethylase, ligm, 3-O-methylgallate complex form”. X-ray diffraction, 1 ligand (7WR). MolNFT v1 #138995 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5X1K
- Type
- protein
- Length
- 1,335 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G2IQS7
- Ligands
- 7WR
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 457 | — | G2IQS7 |
| B | — | protein | 448 | — | G2IQS7 |
| C | — | protein | 430 | — | G2IQS7 |
Ligands and binding sites
- 7WR · 3-methoxy-4,5-bis(oxidanyl)benzoic acid · ligand · 3 copies · chains A, B, C
- EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5X1K · Vanillate/3-O-methylgallate O-demethylase, LigM, 3-O-methylgallate complex form · the same entry in another collection · chain A against A, TM-score 1.00
- G2IQS7 · AlphaFold monomer V2.0 prediction for VANILLATE/3-O-methylgallate O-demethylase (G2IQS7) · a predicted model of the same protein · chain B against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G2IQS7
- Elsewhere: RCSB PDB 5X1K · PDBe 5X1K · UniProt G2IQS7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.