MolNFT v1 · #138901 · protein

Crystal structure of chaetomium thermophilum UTP10 middle domain

5WY3 · Putative uncharacterized protein: “Crystal structure of chaetomium thermophilum UTP10 middle domain”. X-ray diffraction, 5 pockets (best druggability 0.49). MolNFT v1 #138901 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 5WY3
Type: protein
Length: 729 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative uncharacterized protein
UniProt: G0S5L1
Pockets: 5 · best druggability 0.49

Structure

x-ray diffraction · 2 distinct chains · 67% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative uncharacterized protein	protein	363	68% helix, 1% strand	G0S5L1
B	Putative uncharacterized protein	protein	366	66% helix, 1% strand	G0S5L1

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	168	0.49	0.77	24	empty
2	158	0.48	0.77	25	empty
3	159	0.48	0.77	29	empty
4	90	0.43	0.79	24	empty
5	60	0.38	0.79	19	empty

Interfaces

1 interface between chains.

A–B · 693 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

5WY3 · Crystal structure of Chaetomium thermophilum Utp10 middle domain · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G0S5L1
Elsewhere: RCSB PDB 5WY3 · PDBe 5WY3 · UniProt G0S5L1

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