MolNFT v1 · #138874 · protein

Crystal structure of zikv mtase in complex with sah

5WXB · MRNA cap 0-1 NS5-type mt: “Crystal structure of zikv mtase in complex with sah”. X-ray diffraction, 1 ligand (SAH), 1 pocket (best druggability 0.66). MolNFT v1 #138874 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5WXB
Type: protein
Length: 264 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: MRNA cap 0-1 NS5-type mt
UniProt: A0A167V0D5
Ligands: SAH
Pockets: 1 · best druggability 0.66

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	MRNA cap 0-1 NS5-type mt	protein	264	36% helix, 16% strand	A0A167V0D5

Ligands and binding sites

SAH · S-adenosyl-L-homocysteine · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	508	0.66	0.77	47	SAH

Compared structures

5WXB · crystal structure of ZIKV MTase in complex with SAH · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A167V0D5
Elsewhere: RCSB PDB 5WXB · PDBe 5WXB · UniProt A0A167V0D5

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