MolNFT v1 · #138797 · protein
Serratia marcescens short-chain DEHYDROGENASE/REDUCTASE F98A/F202L
5WUL: “Serratia marcescens short-chain DEHYDROGENASE/REDUCTASE F98A/F202L”. X-ray diffraction, 4 pockets (best druggability 0.73). MolNFT v1 #138797 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5WUL
- Type
- protein
- Length
- 464 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Short-chain dehydrogenase
- UniProt
- A0A192ICX3
- Pockets
- 4 · best druggability 0.73
Structure
x-ray diffraction · 2 distinct chains · 44% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Short-chain dehydrogenase | protein | 245 | 46% helix, 18% strand | A0A192ICX3 |
| B | Short-chain dehydrogenase | protein | 219 | 41% helix, 21% strand | A0A192ICX3 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 667 | 0.73 | 0.79 | 51 | empty |
| 2 | 298 | 0.54 | 0.75 | 42 | empty |
| 3 | 150 | 0.46 | 0.77 | 20 | empty |
| 4 | 118 | 0.45 | 0.78 | 23 | empty |
Interfaces
1 interface between chains.
- A–B · 1539 Ų buried · 31 hydrogen bonds · protein-protein
Compared structures
- 5WUL · Serratia marcescens short-chain dehydrogenase/reductase F98A/F202L · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A192ICX3
- Elsewhere: RCSB PDB 5WUL · PDBe 5WUL · UniProt A0A192ICX3
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