MolNFT v1 · #138609 · protein
Crystal structure of dihydrodipicolinate reductase dapb from coxiella burnetii
5WOL: “Crystal structure of dihydrodipicolinate reductase dapb from coxiella burnetii”. X-ray diffraction, 3 ligands (6PC, NAP, SO4). MolNFT v1 #138609 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5WOL
- Type
- protein
- Length
- 230 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P24703
- Ligands
- 6PC, NAP, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 230 | — | P24703 |
Ligands and binding sites
- 6PC · Pyridine-2-carboxylic acid · ligand · 2 copies · chains A
- NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A
- PE3 · 3,6,9,12,15,18,21,24,27,30,33,36,39-tridecaoxahentetracontane-1,41-diol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5WOL · Crystal structure of dihydrodipicolinate reductase DapB from Coxiella burnetii · the same entry in another collection · chain A against A, TM-score 1.00
- P24703 · AlphaFold monomer V2.0 prediction for 4-hydroxy- tetrahydrodipicolinate reductase (P24703) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24703
- Elsewhere: RCSB PDB 5WOL · PDBe 5WOL · UniProt P24703
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