MolNFT v1 · #138469 · protein
Crystal structure of a GH1 beta-glucosidase retrieved from microbial metagenome of poraque amazon lake
5WKA: “Crystal structure of a GH1 beta-glucosidase retrieved from microbial metagenome of poraque amazon lake”. X-ray diffraction. MolNFT v1 #138469 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5WKA
- Type
- protein
- Length
- 1,859 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 467 | — | — |
| B | — | protein | 458 | — | — |
| C | — | protein | 466 | — | — |
| D | — | protein | 468 | — | — |
Ligands and binding sites
- GOL · Glycerol · additive · 6 copies · chains A, B, C, D
- PEG · Di(hydroxyethyl)ether · additive · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5WKA · Crystal structure of a GH1 beta-glucosidase retrieved from microbial metagenome of… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5WKA · PDBe 5WKA
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